Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | OCAR_7046 | P57929 | - | 3001652 - 3002236 | 21517.8 |
| trans-aconitate 2-methyltransferase | OCAR_7047 | B6JIA0 | - | 3002403 - 3003173 | 29011.8 |
| putative abc transporter atp-binding protein chvd | OCAR_7048 | P9WQK2 | - | 3003191 - 3004840 | 61388.9 |
| nadp-specific glutamate dehydrogenase | OCAR_7049 | Q8RQP4 | + | 3005303 - 3006646 | 48749.3 |
| erfk/ybis/ycfs/ynhg | OCAR_7050 | P39176 | - | 3006761 - 3007924 | 40745.9 |
| conserved hypothetical protein | OCAR_7051 | Not Available | + | 3008338 - 3008862 | 19036.8 |
| conserved hypothetical protein | OCAR_7052 | Q24JL3 | - | 3008882 - 3009736 | 30782.4 |
| rhodanese domain protein | OCAR_7053 | O32072 | - | 3009754 - 3010170 | 15627.9 |
| vwa containing coxe family protein | OCAR_7054 | Not Available | - | 3010194 - 3011387 | 46072.7 |
| aaa_5 atpase | OCAR_7055 | O27092 | + | 3011541 - 3012383 | 32147.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.