Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| choloylglycine hydrolase | OCAR_7036 | P12256 | - | 2994394 - 2995440 | 38307.9 |
| hypothetical protein | OCAR_7037 | Not Available | + | 2995429 - 2995566 | 4999.3 |
| alpha/beta hydrolase fold protein | OCAR_7038 | O27848 | + | 2995615 - 2996673 | 38085.7 |
| putative membrane protein of unknown function | OCAR_7039 | O34343 | + | 2996877 - 2997578 | 24473.4 |
| bacterioferritin | OCAR_7040 | Q8FW95 | - | 2997842 - 2998342 | 19491.0 |
| hypothetical protein | OCAR_7041 | Not Available | - | 2998483 - 2998599 | 3660.2 |
| conserved hypothetical protein | OCAR_7042 | Not Available | + | 2999103 - 2999459 | 12804.8 |
| conserved hypothetical protein | OCAR_7043 | Not Available | + | 2999644 - 2999928 | 9566.55 |
| conserved hypothetical protein | OCAR_7044 | Not Available | + | 3000076 - 3000306 | 8282.3 |
| lytic murein transglycosylase | OCAR_7045 | P41052 | - | 3000338 - 3001540 | 43850.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.