Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative lipoprotein | OCAR_7026 | Not Available | - | 2985142 - 2986614 | 53418.0 |
| putative membrane protein | OCAR_7027 | Not Available | - | 2986623 - 2988101 | 51858.8 |
| glycine oxidase thio | OCAR_7028 | O34292 | + | 2988369 - 2989418 | 38392.7 |
| thiamine biosynthesis protein this | OCAR_7029 | Q1XDE3 | + | 2989409 - 2989606 | 7378.64 |
| thiazole biosynthesis protein thig | OCAR_7030 | Q3SPS2 | + | 2989776 - 2990564 | 28055.0 |
| thiamine-phosphate pyrophosphorylase | OCAR_7031 | O34294 | + | 2990551 - 2991159 | 21832.2 |
| hypothetical protein | OCAR_7032 | Not Available | + | 2991159 - 2991281 | 4308.0 |
| thiamine biosynthesis protein thic | OCAR_7033 | B6JI86 | + | 2991310 - 2993208 | 69559.1 |
| conserved hypothetical protein | OCAR_7034 | Not Available | + | 2993457 - 2993666 | 7466.16 |
| helix-turn-helix, fis-type | OCAR_7035 | P17899 | + | 2994040 - 2994312 | 9654.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.