Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| low-affinity zinc transport protein | OCAR_7016 | P94400 | + | 2975477 - 2976721 | 46928.8 |
| acetyltransferase | OCAR_7017 | P63419 | - | 2976725 - 2977255 | 19097.3 |
| nudix hydrolase | OCAR_7018 | B2SFE8 | - | 2977443 - 2977940 | 18754.7 |
| metallophosphoesterase | OCAR_7019 | C1A2D8 | + | 2978359 - 2979261 | 32715.3 |
| conserved hypothetical protein | OCAR_7020 | Not Available | - | 2979265 - 2979834 | 20393.7 |
| conserved hypothetical protein | OCAR_7021 | Not Available | - | 2980121 - 2980327 | 7691.93 |
| isocitrate lyase | OCAR_7022 | Q9I0K4 | - | 2980366 - 2982003 | 60527.8 |
| dna-binding protein | OCAR_7023 | P9WMI0 | + | 2982186 - 2983643 | 55110.8 |
| conserved hypothetical protein | OCAR_7024 | Not Available | + | 2983706 - 2984281 | 21191.6 |
| conserved hypothetical protein | OCAR_7025 | Not Available | - | 2984552 - 2984752 | 7425.96 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.