Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | OCAR_7006 | Q7N3M0 | - | 2963678 - 2964385 | 26546.6 |
| protein of unknown function | OCAR_7007 | Not Available | - | 2964389 - 2964994 | 21990.4 |
| atpase associated with various cellular activities, aaa_3 | OCAR_7008 | P94474 | + | 2965318 - 2966319 | 35659.1 |
| duf58 | OCAR_7009 | P9WLX4 | + | 2966319 - 2967251 | 34626.1 |
| double-transmembrane region | OCAR_7010 | Not Available | + | 2967248 - 2970079 | 100610.0 |
| conserved hypothetical protein | OCAR_7011 | Not Available | + | 2970222 - 2972288 | 74462.5 |
| conserved hypothetical protein | OCAR_7012 | Not Available | + | 2972413 - 2972769 | 12140.5 |
| hypothetical protein | OCAR_7013 | Not Available | - | 2972803 - 2973003 | 6631.84 |
| tonb-dependent receptor, plug | OCAR_7014 | Q9JZN9 | + | 2973005 - 2975254 | 80680.1 |
| hypothetical protein | OCAR_7015 | Not Available | - | 2975387 - 2975512 | 4587.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.