Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase type 11 | OCAR_6986 | Q2TBP8 | + | 2945028 - 2946008 | 34810.4 |
| secreted repeat protein | OCAR_6987 | Not Available | + | 2946072 - 2946467 | 13584.2 |
| lema | OCAR_6988 | A8AVK0 | + | 2946748 - 2947308 | 20309.2 |
| peptidase m48, ste24p | OCAR_6989 | Q64V41 | + | 2947438 - 2948607 | 41708.4 |
| conserved hypothetical protein | OCAR_6990 | Not Available | + | 2948747 - 2949508 | 28052.3 |
| conserved hypothetical protein | OCAR_6991 | Not Available | + | 2949555 - 2950220 | 25197.4 |
| adenine phosphoribosyltransferase | OCAR_6992 | Q3SPC5 | - | 2950248 - 2950802 | 19734.2 |
| anthranilate synthase | OCAR_6993 | P50872 | - | 2950803 - 2952926 | 77517.8 |
| carboxymethylenebutenolidase | OCAR_6994 | P46209 | - | 2953280 - 2953954 | 24205.7 |
| cytochrome b/c1 | OCAR_6995 | P51131 | - | 2954135 - 2956201 | 75993.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.