Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-[acyl-carrier-protein] reductase | OCAR_6966 | Q49117 | + | 2923134 - 2923916 | 27427.6 |
| mfs permease | OCAR_6967 | A6X7E7 | + | 2924024 - 2925250 | 42761.9 |
| transcriptional regulator, gntr family | OCAR_6968 | P32425 | - | 2925301 - 2925990 | 25850.9 |
| major facilitator superfamily mfs_1 | OCAR_6969 | Q51330 | + | 2926423 - 2927718 | 46345.6 |
| gamma-glutamyltranspeptidase | OCAR_6970 | A6T9C8 | + | 2927784 - 2929379 | 57221.4 |
| putative membrane protein | OCAR_6971 | Not Available | - | 2929605 - 2931113 | 54754.3 |
| ribonuclease hii (rnase hii) | OCAR_6972 | B3QHK8 | - | 2931181 - 2931960 | 27649.5 |
| acetyltransferase, gnat family | OCAR_6973 | P49855 | - | 2932019 - 2932555 | 19269.4 |
| radical sam | OCAR_6974 | P9WL78 | - | 2932609 - 2933748 | 42065.7 |
| conserved hypothetical protein | OCAR_6975 | Not Available | + | 2933899 - 2934219 | 11489.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.