Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase small | OCAR_6956 | B2RK25 | - | 2914405 - 2915205 | 27583.1 |
| conserved hypothetical protein | OCAR_6957 | Not Available | - | 2915195 - 2915422 | 7996.67 |
| octaprenyl-diphosphate synthase | OCAR_6958 | P0AD57 | + | 2915516 - 2916526 | 35993.5 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | OCAR_6959 | Q6NAZ1 | - | 2916528 - 2917418 | 30807.3 |
| tetratricopeptide tpr_2 | OCAR_6960 | Not Available | - | 2917555 - 2919339 | 65237.5 |
| hypothetical protein | OCAR_6961 | Not Available | + | 2919328 - 2919513 | 6747.19 |
| putative domain of unknown function | OCAR_6962 | Q6A553 | - | 2919571 - 2920305 | 26643.8 |
| electron transfer flavoprotein-ubiquinone oxidoreductase, (etf-qo) | OCAR_6963 | Q9HZP5 | - | 2920381 - 2922054 | 60722.4 |
| hypothetical protein | OCAR_6964 | Not Available | + | 2922053 - 2922229 | 6251.55 |
| uracil-dna glycosylase, family 4 | OCAR_6965 | Q5SKC5 | + | 2922226 - 2923053 | 30623.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.