Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyruvate, phosphate dikinase | OCAR_6946 | Q59754 | - | 2905191 - 2908136 | 106517.0 |
| conserved hypothetical protein | OCAR_6947 | Not Available | - | 2908253 - 2908396 | 5099.83 |
| conserved hypothetical protein | OCAR_6948 | Not Available | + | 2908606 - 2908959 | 13066.8 |
| glycyl-trna synthetase, beta subunit | OCAR_6949 | A5EED4 | - | 2909040 - 2911457 | 89260.9 |
| protein of unknown function | OCAR_6950 | Not Available | - | 2911463 - 2911597 | 4907.95 |
| hypothetical protein | OCAR_6951 | Not Available | + | 2911664 - 2911828 | 6547.16 |
| glycyl-trna synthetase, alpha subunit | OCAR_6952 | B6JEV8 | - | 2911957 - 2912871 | 34446.8 |
| hypothetical protein | OCAR_6953 | Not Available | + | 2912872 - 2913036 | 5928.17 |
| conserved hypothetical protein | OCAR_6954 | Not Available | - | 2913061 - 2913246 | 6875.36 |
| peptidase s49 | OCAR_6955 | Q2YMB3 | - | 2913259 - 2914152 | 31849.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.