Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | OCAR_6936 | Not Available | + | 2894996 - 2895976 | 36581.6 |
| hypothetical protein | OCAR_6937 | Not Available | + | 2896090 - 2896206 | 4174.65 |
| conserved hypothetical protein | OCAR_6938 | Not Available | + | 2896266 - 2897549 | 47571.4 |
| conserved hypothetical protein | OCAR_6939 | Not Available | - | 2897606 - 2898139 | 19385.1 |
| protein yhdh | OCAR_6940 | Q3J6K9 | - | 2898265 - 2899251 | 34035.5 |
| quinolinate synthetase complex, a subunit | OCAR_6942 | C3M8U4 | + | 2899525 - 2900631 | 40840.4 |
| hypothetical protein | OCAR_6941 | Not Available | - | 2900615 - 2900803 | 6700.22 |
| l-aspartate oxidase | OCAR_6943 | Q92R32 | + | 2900822 - 2902420 | 54691.3 |
| nicotinate-nucleotide diphosphorylase | OCAR_6944 | P77938 | + | 2902422 - 2903312 | 30808.4 |
| cell wall hydrolase, sleb | OCAR_6945 | P50739 | - | 2903509 - 2904906 | 50665.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.