Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydrogenase | OCA5_RS01195 | Not Available | + | 254972 - 256084 | 39646.0 |
| hypothetical protein | OCA5_RS19225 | Not Available | + | 256142 - 256294 | 5476.55 |
| hypothetical protein | OCA5_RS01200 | Not Available | - | 256328 - 256696 | 13369.9 |
| aspartate-semialdehyde dehydrogenase | OCA5_RS01205 | Not Available | + | 256992 - 258026 | 37504.9 |
| carbonic anhydrase | OCA5_RS01210 | Not Available | - | 258129 - 258827 | 25239.2 |
| hpch/hpai aldolase/citrate lyase family protein | OCA5_RS01215 | Not Available | + | 258942 - 259835 | 31625.0 |
| 3-isopropylmalate dehydratase small subunit | OCA5_RS01220 | Not Available | - | 259895 - 260500 | 22535.9 |
| hypothetical protein | OCA5_RS19350 | Not Available | + | 260676 - 261032 | 12751.2 |
| hypothetical protein | OCA5_RS19355 | Not Available | + | 261345 - 261683 | 13054.5 |
| 3-isopropylmalate dehydratase large subunit | OCA5_RS01235 | Not Available | - | 261769 - 263181 | 50760.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.