Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | OCAR_6916 | Not Available | - | 2878067 - 2878960 | 31724.8 |
| putative domain of unknown function | OCAR_6917 | Not Available | + | 2879085 - 2879813 | 25353.7 |
| conserved hypothetical protein | OCAR_6919 | Not Available | + | 2879912 - 2880760 | 31332.0 |
| metallo-beta-lactamase superfamily protein | OCAR_6918 | Q1LZ83 | - | 2880733 - 2881662 | 33656.1 |
| glutaryl-coa dehydrogenase, (gcd) | OCAR_6920 | Q60759 | - | 2881718 - 2882923 | 44089.9 |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase/gtp cyclohydrolase ii | OCAR_6921 | P47924 | - | 2883007 - 2884083 | 38707.4 |
| conserved hypothetical protein | OCAR_6922 | Not Available | + | 2884345 - 2884803 | 16019.3 |
| Trna-pro | Not Available | Not Available | + | 2885314 - 2885390 | Not Available |
| sua5/ycio/yrdc/ywlc family protein | OCAR_6924 | Q9UYB2 | + | 2885499 - 2886467 | 33041.9 |
| d-2-hydroxyglutarate dehydrogenase | OCAR_6925 | B8B7X6 | + | 2886464 - 2887876 | 49733.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.