Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosomal rna large subunit methyltransferase j | OCAR_6896 | P19672 | + | 2859235 - 2859966 | 25780.0 |
| hypothetical rna methyltransferase | OCAR_6897 | Q89RW4 | + | 2859966 - 2861207 | 44450.5 |
| methyl-accepting chemotaxis sensory transducer | OCAR_6898 | O32239 | + | 2861444 - 2863126 | 58839.0 |
| hypothetical protein | OCAR_6899 | Not Available | - | 2863210 - 2863692 | 17181.6 |
| conserved hypothetical protein | OCAR_6900 | Not Available | + | 2863714 - 2863896 | 6890.27 |
| chorismate synthase | OCAR_6901 | B6JFJ0 | - | 2863913 - 2864992 | 38602.8 |
| phosphoglycerate mutase | OCAR_6902 | A1TC01 | - | 2865282 - 2865881 | 22083.3 |
| enoyl-[acyl-carrier-protein] reductase | OCAR_6903 | P58380 | - | 2866070 - 2866891 | 29639.4 |
| ecf family sigma factor | OCAR_6904 | B3Q6P8 | + | 2867074 - 2867562 | 18256.9 |
| anti-sigma factor | OCAR_6905 | Not Available | + | 2867574 - 2868347 | 28357.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.