Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | OCAR_6876 | Not Available | + | 2838111 - 2838224 | 4289.21 |
| carboxymuconolactone decarboxylase | OCAR_6877 | Not Available | + | 2838337 - 2838921 | 20357.0 |
| acyl-coa dehydrogenase | OCAR_6878 | P12007 | + | 2838918 - 2840027 | 38937.8 |
| transporter atpase | OCAR_6879 | Q39LW7 | + | 2840024 - 2840836 | 29228.6 |
| abc-type nitrate/sulfonate/bicarbonate transport systems periplasmic components | OCAR_6880 | Q44292 | + | 2840889 - 2842091 | 44075.1 |
| binding-protein-dependent transport systems inner membrane component | OCAR_6881 | Q55106 | + | 2842088 - 2842939 | 30120.8 |
| conserved hypothetical protein | OCAR_6882 | Not Available | - | 2843042 - 2843953 | 33243.4 |
| hypothetical protein | OCAR_6883 | Not Available | + | 2844989 - 2845150 | 5539.48 |
| transcriptional regulator, tetr family | OCAR_6884 | Q88FX7 | + | 2845102 - 2845788 | 26585.2 |
| cytochrome c2 | OCAR_6885 | D5QVH0 | - | 2845928 - 2846368 | 15723.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.