Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-carrier-protein s-malonyltransferase | OCAR_6866 | P63459 | - | 2828255 - 2829175 | 32189.7 |
| triphosphoribosyl-dephospho-coa synthase mdcb | OCAR_6867 | C1DNP5 | - | 2829181 - 2830038 | 30360.1 |
| holo-acp synthase, malonate decarboxylase-specific | OCAR_6868 | Q89XP2 | - | 2830035 - 2830706 | 24486.5 |
| malonate decarboxylase gamma subunit | OCAR_6869 | O06927 | - | 2830703 - 2831431 | 26368.7 |
| malonate decarboxylase, beta subunit | OCAR_6870 | O06926 | - | 2831428 - 2832315 | 31678.8 |
| malonate decarboxylase acyl carrier protein | OCAR_6871 | B4SNX3 | - | 2832312 - 2832629 | 11324.6 |
| malonate decarboxylase, alpha subunit | OCAR_6872 | O06924 | - | 2832634 - 2834304 | 61344.5 |
| possible tcta subunit of the tripartite tricarboxylate transport | OCAR_6873 | P70795 | - | 2834388 - 2835911 | 53768.4 |
| conserved hypothetical protein | OCAR_6874 | Not Available | - | 2835921 - 2836427 | 18758.1 |
| putative exported protein of unknown function | OCAR_6875 | Q45389 | - | 2836516 - 2837499 | 35609.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.