Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase class 3 | OCAR_6856 | P80094 | - | 2820267 - 2821379 | 39350.8 |
| conserved hypothetical protein | OCAR_6857 | Not Available | - | 2821379 - 2821690 | 10993.9 |
| abc-type transport system atp-binding protein i | OCAR_6858 | P45073 | - | 2821732 - 2822451 | 26168.7 |
| abc-type transport system atp-binding protein ii | OCAR_6859 | O28881 | - | 2822451 - 2823257 | 28949.0 |
| inner-membrane translocator | OCAR_6860 | P30296 | - | 2823257 - 2824219 | 34383.5 |
| inner-membrane translocator | OCAR_6861 | P0A2J2 | - | 2824267 - 2825148 | 30526.6 |
| twin-arginine translocation pathway signal | OCAR_6862 | Q2YK58 | - | 2825151 - 2826425 | 46363.6 |
| fatty acid hydroxylase | OCAR_6863 | Not Available | + | 2826659 - 2827462 | 31386.2 |
| hypothetical protein | OCAR_6864 | Not Available | + | 2827487 - 2827888 | 14205.8 |
| hypothetical protein | OCAR_6865 | Not Available | + | 2827912 - 2828112 | 7687.66 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.