Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| periplasmic binding protein | OCAR_6846 | Not Available | - | 2810797 - 2810994 | 7387.12 |
| Trna-gln | Not Available | Not Available | + | 2811460 - 2811534 | Not Available |
| fe(3+) ions import atp-binding protein fbpc | OCAR_6848 | Q2K8C8 | - | 2811789 - 2812889 | 39924.9 |
| binding-protein-dependent transport systems inner membrane component | OCAR_6849 | Q44123 | - | 2812919 - 2814646 | 62194.0 |
| extracellular solute-binding protein, family 1 | OCAR_6850 | P0A234 | - | 2814698 - 2816044 | 48826.3 |
| phosphonoacetate hydrolase | OCAR_6851 | Q51782 | - | 2816095 - 2817351 | 44806.9 |
| transcriptional regulator, lysr family | OCAR_6852 | P11720 | + | 2817445 - 2818335 | 33047.1 |
| probable arylformamidase (kynurenine formamidase) (kf) | OCAR_6853 | Q8K4H1 | + | 2818451 - 2819314 | 31479.3 |
| hypothetical protein | OCAR_6854 | Not Available | - | 2819401 - 2819535 | 4918.87 |
| transcriptional regulator, gntr family | OCAR_6855 | P0ACM2 | + | 2819472 - 2820215 | 28200.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.