Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nitrite reductase | OCAR_6836 | P42435 | - | 2800813 - 2803263 | 88374.7 |
| transporter, nitrate/nitrite porter (nnp) family | OCAR_6837 | Q9RA46 | - | 2803284 - 2804585 | 46258.4 |
| two-component response regulator | OCAR_6838 | P9WGM2 | - | 2804960 - 2805559 | 22050.8 |
| conserved hypothetical protein | OCAR_6839 | P0AFV1 | - | 2805658 - 2806890 | 44515.6 |
| conserved hypothetical protein | OCAR_6840 | Not Available | - | 2806883 - 2807335 | 16407.1 |
| putative signal-transduction protein with cbs domains | OCAR_6841 | Q12XS2 | - | 2808022 - 2808606 | 20832.1 |
| hypothetical protein | OCAR_6842 | Not Available | - | 2808536 - 2808724 | 6902.57 |
| iron(iii) dicitrate transport atp-binding protein fece | OCAR_6843 | P15031 | - | 2808890 - 2809678 | 27839.9 |
| hmuu protein | OCAR_6844 | O34451 | - | 2809675 - 2809923 | 8492.97 |
| hmuu protein | OCAR_6845 | Q57552 | - | 2809935 - 2810756 | 28664.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.