Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ompa family protein | OCA5_RS19395 | Not Available | - | 244249 - 246096 | 63512.2 |
| hypothetical protein | OCA5_RS19400 | Not Available | - | 246310 - 246558 | 8618.96 |
| mapeg family protein | OCA5_RS01155 | Not Available | + | 246695 - 247072 | 13422.5 |
| succinate dehydrogenase iron-sulfur subunit | OCA5_RS01160 | Not Available | - | 247086 - 247868 | 29423.8 |
| succinate dehydrogenase flavoprotein subunit | OCA5_RS01165 | Not Available | - | 247968 - 249782 | 66041.5 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | OCA5_RS01170 | Not Available | - | 249786 - 250190 | 14204.8 |
| succinate dehydrogenase, cytochrome b556 subunit | OCA5_RS01175 | Not Available | - | 250187 - 250582 | 14117.3 |
| sulfite exporter taue/safe family protein | OCA5_RS01180 | Not Available | + | 251096 - 251950 | 30295.3 |
| malonate--coa ligase | OCA5_RS01185 | Not Available | - | 251984 - 253531 | 56075.5 |
| ybfb/yjij family mfs transporter | OCA5_RS01190 | Not Available | - | 253633 - 254844 | 41454.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.