Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase, zinc-containing | OCAR_6826 | P9WQC0 | - | 2790517 - 2791500 | 34859.2 |
| heat shock protein hsp20 | OCAR_6827 | Q4UKR8 | + | 2791627 - 2792100 | 17626.2 |
| conserved hypothetical protein | OCAR_6828 | Not Available | - | 2792167 - 2792562 | 15340.1 |
| abc transporter permease protein | OCAR_6829 | Q92JD8 | + | 2792731 - 2793864 | 40687.7 |
| abc transporter atp-binding protein | OCAR_6830 | P30769 | + | 2793867 - 2794646 | 28114.2 |
| putative abc transporter | OCAR_6831 | P29285 | + | 2794655 - 2795770 | 39337.1 |
| uspa | OCAR_6832 | Q57951 | - | 2795812 - 2796264 | 15979.2 |
| siroheme synthase | OCAR_6833 | A1JJS8 | - | 2796343 - 2797827 | 52880.8 |
| nitrate reductase | OCAR_6834 | Q06457 | - | 2797799 - 2800501 | 96681.0 |
| nitrite reductase | OCAR_6835 | P42436 | - | 2800479 - 2800808 | 11516.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.