Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conserved domain protein | OCAR_6816 | P55734 | + | 2776678 - 2776881 | 7325.32 |
| efflux transporter, rnd family, mfp subunit | OCAR_6817 | Q44585 | + | 2776941 - 2777960 | 36261.8 |
| acriflavin resistance protein | OCAR_6818 | P25197 | + | 2777957 - 2781178 | 116608.0 |
| hypothetical protein | OCAR_6819 | Not Available | - | 2781315 - 2781434 | 4336.22 |
| conserved hypothetical protein | OCAR_6820 | P9WLN2 | + | 2781983 - 2783572 | 57320.3 |
| n-acetyltransferase | OCAR_6821 | P76594 | + | 2783628 - 2786324 | 95480.9 |
| d-xylulose 5-phosphate/d-fructose 6-phosphate phosphoketolase | OCAR_6822 | B2IGR2 | - | 2786353 - 2788746 | 89044.9 |
| hypothetical protein | OCAR_6823 | Not Available | + | 2789021 - 2789158 | 5070.2 |
| hypothetical protein | OCAR_6824 | Not Available | + | 2789206 - 2789526 | 12206.7 |
| cbs:transport associated | OCAR_6825 | Q58799 | - | 2789629 - 2790357 | 27375.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.