Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| malonyl-coa decarboxylase (mcd) superfamily | OCAR_6806 | P12617 | + | 2763943 - 2765310 | 51196.9 |
| feruloyl-coa synthetase | OCAR_6807 | O07610 | + | 2765366 - 2766856 | 53836.4 |
| phosophohydrolase | OCAR_6808 | Not Available | - | 2766862 - 2767815 | 35039.8 |
| glutathione s-transferase protein | OCAR_6809 | Q52828 | - | 2767829 - 2768449 | 22730.1 |
| transcriptional regulator, lysr family | OCAR_6810 | P43011 | + | 2768554 - 2769468 | 33510.0 |
| putative isonitrile hydratase | OCAR_6811 | Q8G9F9 | - | 2769516 - 2770220 | 25042.2 |
| gntr-family transcriptional regulator | OCAR_6812 | P40193 | + | 2770492 - 2771769 | 46572.7 |
| putative ggdef family protein | OCAR_6813 | P0AA90 | - | 2771968 - 2773359 | 53090.2 |
| methyl-accepting chemotaxis sensory transducer with pas/pac sensor | OCAR_6814 | Q9I3S1 | + | 2774166 - 2775845 | 61350.3 |
| regulatory protein, arsr | OCAR_6815 | Q8UAA8 | + | 2776227 - 2776571 | 12745.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.