Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| o-succinylbenzoate-coa synthase | OCAR_6795 | Q97MK4 | + | 2752283 - 2753371 | 39644.5 |
| transcriptional regulator, iclr family | OCAR_6796 | Q0K846 | + | 2753403 - 2754182 | 29040.3 |
| glycosyl transferase, family 2 | OCAR_6797 | P71059 | + | 2754360 - 2755361 | 38205.8 |
| uspa | OCAR_6798 | Not Available | + | 2755497 - 2756345 | 30274.2 |
| transcriptional regulator, lysr family | OCAR_6799 | A5F9F9 | + | 2756660 - 2757553 | 33616.8 |
| putative abc branched chain amino acid family transporter | OCAR_6800 | Q2YLF8 | - | 2757659 - 2758951 | 47452.6 |
| high-affinity branched-chain amino acid abc transporter, atp-binding protein | OCAR_6801 | P0A192 | - | 2758963 - 2759670 | 25731.8 |
| branched-chain amino acid abc transporter atp-binding protein | OCAR_6802 | P21629 | - | 2759667 - 2760419 | 27132.0 |
| hypothetical protein | OCAR_6804 | Not Available | + | 2762408 - 2762539 | 4860.05 |
| aliphatic nitrilase | OCAR_6805 | B6HVR6 | + | 2762886 - 2763950 | 38164.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.