Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative quinone oxidoreductase | OCAR_6785 | Q59I44 | - | 2743742 - 2744734 | 35486.2 |
| putative protein of unknown function duf81 | OCAR_6786 | Not Available | - | 2744743 - 2745471 | 25195.7 |
| glutathione s-transferase | OCAR_6787 | P0ACA8 | - | 2745511 - 2746134 | 22401.0 |
| methanesulfonate monooxygenase component | OCAR_6788 | Q00458 | - | 2746174 - 2746494 | 11777.9 |
| methanesulfonate monooxygenase component | OCAR_6789 | Q9X406 | - | 2746478 - 2747530 | 37195.6 |
| putative rieske | OCAR_6790 | Q96NN9 | - | 2747527 - 2747892 | 13035.8 |
| amidohydrolase family | OCAR_6791 | Q0SFL6 | - | 2747896 - 2748969 | 40494.2 |
| integral membrane protein | OCAR_6792 | P70795 | - | 2749004 - 2750554 | 54275.9 |
| hypothetical protein | OCAR_6793 | Not Available | - | 2750565 - 2751104 | 19422.6 |
| uncharacterized protein | OCAR_6794 | P0A177 | - | 2751175 - 2752125 | 33800.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.