Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoadipate:succinyl-coa transferase subunit b | OCAR_6775 | Q8VPF2 | - | 2735914 - 2736645 | 25958.3 |
| glutaconate coa-transferase, subunit a | OCAR_6776 | O29069 | - | 2736642 - 2737085 | 16451.7 |
| coenzyme a transferase | OCAR_6777 | O29069 | - | 2737096 - 2737386 | 9990.36 |
| feruloyl-coa synthetase | OCAR_6778 | O07610 | - | 2737383 - 2738924 | 56186.1 |
| transcriptional regulator, iclr family | OCAR_6779 | P42968 | - | 2738918 - 2739742 | 30328.7 |
| enoyl-coa hydratase/isomerase | OCAR_6780 | A4YI89 | - | 2740012 - 2740725 | 25329.6 |
| alpha-methylacyl-coa racemase | OCAR_6781 | Q7CXU0 | - | 2740722 - 2741894 | 41999.1 |
| transcriptional regulator, iclr family | OCAR_6782 | P76268 | - | 2741922 - 2742695 | 27595.3 |
| hypothetical protein | OCAR_6783 | Not Available | + | 2742759 - 2742881 | 4640.58 |
| cysteine dioxygenase type i | OCAR_6784 | Q9I0N5 | - | 2742959 - 2743600 | 23766.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.