Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribonucleoside-diphosphate reductase, beta subunit | OCAR_6755 | Q9PL92 | + | 2707319 - 2708452 | 43074.1 |
| ggdef domain protein | OCAR_6756 | P0AA90 | + | 2708740 - 2710365 | 58118.2 |
| conserved hypothetical protein | OCAR_6757 | Not Available | + | 2710452 - 2710733 | 10146.0 |
| bifunctional protein puta | OCAR_6758 | P95629 | - | 2710760 - 2714464 | 132328.0 |
| transcriptional regulator, cadc-family | OCAR_6759 | Q9Z3Q0 | - | 2714577 - 2716157 | 58348.6 |
| transcriptional regulator, lysr-family | OCAR_6760 | P48279 | + | 2716229 - 2717104 | 31135.3 |
| transcriptional regulatory protein | OCAR_6761 | P35319 | + | 2717177 - 2718127 | 34360.9 |
| non-heme chloroperoxidase | OCAR_6762 | O05691 | + | 2718229 - 2719218 | 36262.2 |
| fad-dependent pyridine nucleotide-disulphide oxidoreductase | OCAR_6763 | P9WJJ0 | + | 2719326 - 2720531 | 42368.7 |
| conserved hypothetical protein | OCAR_6764 | Not Available | + | 2720794 - 2721087 | 10409.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.