Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, iclr-family | OCAR_6745 | Q0K846 | + | 2693816 - 2694592 | 28244.6 |
| phosphate acetyltransferase | OCAR_6746 | Q9X448 | + | 2694592 - 2695506 | 31692.2 |
| major facilitator family transporter | OCAR_6747 | P37643 | - | 2695745 - 2697070 | 48328.0 |
| alcohol dehydrogenase acceptor | OCAR_6748 | Q6UPE0 | - | 2697100 - 2698725 | 59035.5 |
| transcriptional regulator, iclr family | OCAR_6749 | Q0K846 | + | 2698840 - 2699691 | 30795.3 |
| hypothetical protein | OCAR_6750 | Not Available | + | 2699869 - 2700096 | 8043.49 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | OCAR_6751 | Q3SNK1 | - | 2700168 - 2702582 | 88915.6 |
| conserved hypothetical protein | OCAR_6752 | Q7VYQ1 | - | 2702895 - 2703563 | 25463.0 |
| ribonucleoside-diphosphate reductase alpha subunit | OCAR_6754 | O84834 | + | 2704261 - 2707170 | 107530.0 |
| hypothetical protein | OCAR_6753 | Not Available | - | 2707124 - 2707246 | 4308.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.