Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | OCAR_6735 | Not Available | + | 2683607 - 2683783 | 6278.58 |
| succinyl-coa synthase, alpha subunit | OCAR_6736 | O28098 | - | 2683811 - 2684701 | 30967.7 |
| succinyl-coa synthetase beta chain (scs-alpha) | OCAR_6737 | P25126 | - | 2684698 - 2685825 | 39660.9 |
| succinate-semialdehyde dehydrogenase | OCAR_6738 | Q0K845 | - | 2685839 - 2687266 | 51441.9 |
| hypothetical protein | OCAR_6739 | Not Available | + | 2687327 - 2687518 | 6943.36 |
| integral membrane protein | OCAR_6740 | P70795 | - | 2687593 - 2689101 | 52868.5 |
| conserved hypothetical protein | OCAR_6741 | Not Available | - | 2689119 - 2689658 | 19727.5 |
| putative exported protein | OCAR_6742 | P0A177 | - | 2689702 - 2690682 | 34732.1 |
| transcriptional regulator, lysr family | OCAR_6743 | Q8VWE6 | + | 2690834 - 2691709 | 32131.0 |
| sulfoacetaldehyde acetyltransferase | OCAR_6744 | Q92UW6 | - | 2691880 - 2693655 | 64233.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.