Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | OCAR_6725 | Not Available | - | 2672783 - 2673046 | 9740.59 |
| 8-amino-7-oxononanoate synthase, aons | OCAR_6726 | Q7NPW2 | + | 2673205 - 2674344 | 40668.5 |
| dethiobiotin synthase | OCAR_6727 | B6JGN8 | + | 2674341 - 2674973 | 22669.4 |
| adenosylmethionine-8-amino-7-oxononanoate transaminase | OCAR_6728 | Q31SA6 | + | 2674970 - 2676232 | 46276.3 |
| methyl-accepting chemotaxis receptor/sensory transducer | OCAR_6729 | Q2W4T8 | - | 2676410 - 2678146 | 60729.1 |
| hypothetical protein | OCAR_6730 | Not Available | - | 2678411 - 2678530 | 4290.27 |
| aldo/keto reductase | OCAR_6731 | P77735 | + | 2678632 - 2679612 | 36762.0 |
| diguanylate cyclase/phosphodiesterase | OCAR_6732 | Q9ABX9 | - | 2679733 - 2682210 | 90567.0 |
| hypothetical protein | OCAR_6733 | Not Available | + | 2682175 - 2682300 | 4520.53 |
| cyclic nucleotide-binding protein | OCAR_6734 | P47200 | - | 2682427 - 2683182 | 28145.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.