Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin-guanine dinucleotide biosynthesis protein a | OCAR_6715 | Q1QIS8 | + | 2661009 - 2661668 | 23787.7 |
| molybdenum cofactor synthesis domain | OCAR_6716 | Q58296 | - | 2661669 - 2663612 | 67673.5 |
| molybdopterin binding domain | OCAR_6717 | P9WJQ4 | - | 2663614 - 2664720 | 37591.8 |
| ompa domain protein transmembrane region-containing protein | OCAR_6718 | P0A3U4 | - | 2664973 - 2665683 | 25340.7 |
| ku protein | OCAR_6719 | A4Z012 | + | 2665981 - 2666847 | 32857.3 |
| tonb like protein | OCAR_6720 | Q05613 | - | 2667157 - 2667954 | 28373.2 |
| tonb system transport protein exbd | OCAR_6721 | Q05606 | - | 2667967 - 2668437 | 16502.0 |
| exbb | OCAR_6722 | Q05605 | - | 2668449 - 2669375 | 31907.2 |
| pkhd-type hydroxylase | OCAR_6723 | B6JGF2 | - | 2669372 - 2670061 | 25497.4 |
| tonb-dependent receptor, plug | OCAR_6724 | P81549 | - | 2670159 - 2672294 | 77290.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.