Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glcg protein | OCAR_6695 | Not Available | + | 2642201 - 2642632 | 14380.6 |
| l-carnitine dehydratase/bile acid-inducible protein f | OCAR_6696 | Q7CXU0 | + | 2642696 - 2643889 | 43427.0 |
| carnitinyl-coa dehydratase | OCAR_6697 | Q0AVM1 | + | 2643906 - 2644697 | 28478.0 |
| metal-activated pyridoxal enzyme | OCAR_6698 | O82872 | + | 2644708 - 2645808 | 38630.2 |
| amidase, hydantoinase/carbamoylase family | OCAR_6699 | Q6DTN4 | + | 2645829 - 2647082 | 44273.8 |
| conserved hypothetical protein | OCAR_6700 | Not Available | - | 2647093 - 2647680 | 20923.2 |
| conserved hypothetical protein | OCAR_6701 | Not Available | - | 2648029 - 2648238 | 7879.33 |
| formate dehydrogenase, alpha subunit | OCAR_6702 | P61159 | - | 2648325 - 2651096 | 101720.0 |
| tungsten-containing formate dehydrogenase beta subunit | OCAR_6703 | O66841 | - | 2651093 - 2652805 | 62367.5 |
| hypothetical protein | OCAR_6704 | Not Available | + | 2652764 - 2652925 | 6203.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.