Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| secretion protein hlyd | OCAR_6685 | Q57500 | - | 2628970 - 2630130 | 41181.7 |
| transcriptional regulator, tetr family | OCAR_6686 | O53165 | - | 2630145 - 2630846 | 25562.8 |
| integral membrane protein | OCAR_6687 | P70795 | - | 2631090 - 2632601 | 53078.6 |
| conserved hypothetical protein | OCAR_6688 | Not Available | - | 2632614 - 2633177 | 20611.5 |
| hypothetical protein | OCAR_6689 | Q44018 | - | 2633248 - 2634240 | 36402.0 |
| serine--glyoxylate aminotransferase (sgat) | OCAR_6690 | P55819 | - | 2634327 - 2635529 | 43889.1 |
| conserved hypothetical protein | OCAR_6691 | Not Available | - | 2635683 - 2636753 | 39107.4 |
| serine--glyoxylate aminotransferase (sgat) | OCAR_6692 | P55819 | - | 2636825 - 2638114 | 46395.0 |
| transcriptional regulatory protein | OCAR_6693 | Q8GAL4 | + | 2638209 - 2638907 | 26481.6 |
| d-lactate dehydrogenase | OCAR_6694 | P77748 | + | 2639175 - 2642141 | 107869.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.