Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fe-s oxidoreductase | OCAR_6675 | B3QHD1 | - | 2615167 - 2616756 | 59835.0 |
| formate dehydrogenase family accessory protein fdhd | OCAR_6676 | Q8UC79 | + | 2616996 - 2617817 | 29107.1 |
| hypothetical protein | OCAR_6677 | Q89SJ7 | + | 2617859 - 2618617 | 27954.5 |
| conserved domain protein | OCAR_6678 | Q2IS91 | + | 2618610 - 2618831 | 8046.53 |
| oxidoreductase, aldo/keto reductase family | OCAR_6679 | P76234 | - | 2619030 - 2619890 | 31264.1 |
| glycerol-3-phosphate dehydrogenase | OCAR_6680 | P52111 | - | 2619968 - 2621509 | 57023.0 |
| conserved hypothetical protein | OCAR_6681 | Not Available | - | 2621574 - 2622497 | 31157.0 |
| tetratricopeptide tpr_2 | OCAR_6682 | Not Available | - | 2622521 - 2623888 | 50275.3 |
| conserved hypothetical protein | OCAR_6683 | Not Available | - | 2624027 - 2625808 | 67055.0 |
| acriflavin resistance protein | OCAR_6684 | Q57124 | - | 2625867 - 2628950 | 110067.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.