Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa hydrolase/transferase family protein | OCAR_6654 | P38942 | - | 2587349 - 2589187 | 67264.0 |
| hypothetical protein | OCAR_6656 | Not Available | + | 2589233 - 2589406 | 5910.95 |
| type i secretion outer membrane protein, tolc | OCAR_6657 | Q8G0Y6 | + | 2589449 - 2590810 | 48166.1 |
| cation efflux system protein czca | OCAR_6658 | P94177 | - | 2590922 - 2594047 | 112490.0 |
| secretion protein hlyd | OCAR_6659 | P94176 | - | 2594174 - 2595406 | 44593.8 |
| hippuricase | OCAR_6660 | P45493 | - | 2595802 - 2596977 | 41455.5 |
| alcohol dehydrogenase | OCAR_6661 | Q9WWW2 | + | 2597105 - 2598724 | 59443.0 |
| conserved hypothetical protein | OCAR_6662 | Not Available | + | 2598920 - 2599156 | 8298.09 |
| aminotransferase class-iii | OCAR_6663 | A0A0J9X1Q5 | - | 2599364 - 2600755 | 50524.2 |
| conserved hypothetical protein | OCAR_6665 | Not Available | + | 2600879 - 2601514 | 21761.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.