Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | OCAR_6645 | Not Available | - | 2579051 - 2579182 | 4654.66 |
| conserved hypothetical protein | OCAR_6646 | Not Available | + | 2579205 - 2579999 | 29000.7 |
| peptidase c15, pyroglutamyl peptidase i | OCAR_6647 | O73944 | + | 2579996 - 2580658 | 24203.6 |
| twin-arginine translocation pathway signal | OCAR_6649 | Not Available | + | 2580752 - 2582113 | 47295.3 |
| conserved hypothetical protein | OCAR_6648 | Not Available | - | 2582069 - 2582410 | 12478.8 |
| diguanylate cyclase | OCAR_6650 | Q9A5I5 | + | 2582864 - 2584003 | 42042.5 |
| conserved hypothetical protein | OCAR_6652 | Not Available | + | 2584054 - 2585175 | 40825.9 |
| protein of unknown function | OCAR_6651 | A0A0H3CC47 | - | 2585172 - 2585810 | 22754.5 |
| rna polymerase sigma-70 factor | OCAR_6653 | A0A0H3CCX2 | - | 2585807 - 2586358 | 20209.2 |
| conserved hypothetical protein | OCAR_6655 | Not Available | + | 2586719 - 2587372 | 22984.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.