Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| two-component sensor histidine kinase | OCAR_6578 | Q9I0I2 | - | 2525216 - 2526598 | 50372.8 |
| transcriptional regulatory protein qseb | OCAR_6579 | Q9I0I1 | - | 2526588 - 2527262 | 25227.2 |
| type iv pilus assembly pilz | OCAR_6580 | Not Available | - | 2527411 - 2527716 | 11248.6 |
| conserved hypothetical protein | OCAR_6581 | Not Available | - | 2527875 - 2528126 | 8430.09 |
| putative lipoprotein | OCAR_6582 | Not Available | - | 2528128 - 2528520 | 13706.9 |
| hypothetical protein | OCAR_6583 | Not Available | - | 2528540 - 2528788 | 8288.13 |
| excinuclease abc, c subunit domain protein | OCAR_6610 | Q3ITQ4 | + | 2547063 - 2547557 | 18390.2 |
| phage dna packaging protein | OCAR_6611 | Not Available | - | 2547705 - 2549009 | 47609.0 |
| conserved hypothetical protein | OCAR_6612 | Not Available | - | 2548960 - 2549667 | 25625.6 |
| conserved hypothetical protein | OCAR_6613 | Not Available | - | 2549733 - 2549885 | 5457.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.