Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | OCAR_6568 | Not Available | - | 2510646 - 2511680 | 37616.9 |
| glutamate-ammonia-ligase adenylyltransferase | OCAR_6569 | Q139J0 | - | 2512345 - 2515311 | 109480.0 |
| periplasmic sensor signal transduction histidine kinase | OCAR_6570 | Q47457 | - | 2515308 - 2516717 | 51283.6 |
| transcriptional activator protein copr | OCAR_6571 | P0AD00 | - | 2516701 - 2517381 | 25380.5 |
| protease do subfamily | OCAR_6572 | Q2YMX6 | - | 2517560 - 2519146 | 54209.9 |
| cytochrome c biogenesis protein | OCAR_6573 | P45405 | - | 2519309 - 2519875 | 20964.6 |
| cytochrome c-type biogenesis protein ccmf | OCAR_6574 | P45403 | - | 2519958 - 2521943 | 71505.5 |
| cytochrome c-type biogenesis protein cycj | OCAR_6575 | A4YRM0 | - | 2521940 - 2522446 | 18195.0 |
| cytochrome c-type biogenesis protein cych | OCAR_6576 | P45399 | - | 2522494 - 2523594 | 39133.9 |
| conserved hypothetical protein | OCAR_6577 | Not Available | - | 2523705 - 2525087 | 50763.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.