Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyruvate kinase | OCAR_6558 | P70789 | - | 2499521 - 2500930 | 50030.9 |
| 2-dehydropantoate 2-reductase | OCAR_6559 | Q987N5 | - | 2501086 - 2502105 | 37126.7 |
| 2-hydroxy-3-oxopropionate reductase | OCAR_6560 | P77161 | - | 2502170 - 2503060 | 30827.5 |
| hydroxypyruvate isomerase | OCAR_6561 | P30147 | - | 2503100 - 2503885 | 28805.7 |
| glyoxylate carboligase | OCAR_6562 | P0AEP8 | - | 2503925 - 2505718 | 65375.0 |
| acetate operon repressor | OCAR_6563 | A1B8Z4 | + | 2506007 - 2506831 | 30138.3 |
| glutathione-dependent formaldehyde-activating, gfa | OCAR_6564 | Q9CXS4 | + | 2506931 - 2507284 | 12611.0 |
| succinate-coa ligase, alpha subunit subfamily | OCAR_6565 | Q1RH56 | - | 2507473 - 2508354 | 30533.1 |
| succinyl-coa synthetase beta chain (scs-alpha) | OCAR_6566 | Q5L0N7 | - | 2508356 - 2509528 | 41155.5 |
| hypothetical protein | OCAR_6567 | Not Available | + | 2509517 - 2509942 | 15499.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.