Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, marr family | OCAR_6548 | Not Available | + | 2486331 - 2487023 | 25015.8 |
| mip | OCAR_6549 | Not Available | + | 2487152 - 2487697 | 18692.4 |
| formyl-coa transferase | OCAR_6550 | B6JE29 | - | 2487883 - 2489157 | 46191.4 |
| oxalyl-coa decarboxylase | OCAR_6551 | P40149 | - | 2489231 - 2490976 | 61451.6 |
| oxalate/formate antiporter | OCAR_6552 | Q51330 | + | 2491646 - 2492950 | 46769.3 |
| coa-binding | OCAR_6553 | E7FI45 | + | 2493284 - 2495416 | 75356.5 |
| succinyl-coa synthetase beta chain (scs-alpha) | OCAR_6554 | B6JE33 | + | 2495429 - 2496625 | 42547.6 |
| succinyl-coa ligase | OCAR_6555 | Q4ULQ8 | + | 2496630 - 2497538 | 30788.3 |
| transcriptional regulator, gntr family | OCAR_6556 | O05494 | + | 2497678 - 2498436 | 28216.1 |
| fumarylacetoacetate | OCAR_6557 | O28058 | - | 2498711 - 2499484 | 27573.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.