Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | OCAR_6528 | Not Available | - | 2468527 - 2469030 | 18613.5 |
| ribose 5-phosphate isomerase a | OCAR_6529 | B6JE08 | - | 2469041 - 2469751 | 24702.9 |
| phosphoglycolate phosphatase, bacterial | OCAR_6530 | Q98ML8 | + | 2469891 - 2470568 | 24268.2 |
| conserved hypothetical protein | OCAR_6531 | Not Available | + | 2470730 - 2471182 | 15239.3 |
| molybdenum cofactor biosynthesis protein a | OCAR_6532 | Q89NT2 | + | 2471317 - 2472348 | 37750.7 |
| tripartite atp-independent periplasmic transporter | OCAR_6533 | Not Available | + | 2472490 - 2473167 | 25020.0 |
| trap dicarboxylate transporter- dctm subunit | OCAR_6534 | Q9HU16 | + | 2473211 - 2475061 | 67118.9 |
| twin-arginine translocation pathway signal | OCAR_6535 | Q3J1R2 | - | 2475167 - 2476252 | 40106.0 |
| hypothetical protein | OCAR_6536 | Not Available | + | 2476307 - 2476420 | 3959.97 |
| periplasmic mannitol-binding protein | OCAR_6537 | Q3J1R2 | - | 2476442 - 2477530 | 39705.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.