Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | OCAR_6498 | P63450 | + | 2437560 - 2437841 | 10219.0 |
| beta-hydroxyacyl-dehydratase | OCAR_6499 | Q03RV0 | + | 2437854 - 2438321 | 17462.3 |
| beta-ketoacyl synthase | OCAR_6500 | Q9KQH9 | + | 2438318 - 2439517 | 41924.2 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 2 | OCAR_6501 | Q83E37 | + | 2439536 - 2440816 | 44453.8 |
| alcohol dehydrogenase | OCAR_6502 | Q06004 | + | 2441065 - 2442087 | 36565.8 |
| lipid a biosynthesis acyltransferase | OCAR_6503 | P59198 | + | 2442088 - 2443020 | 34738.9 |
| putrescine-binding periplasmic protein | OCAR_6504 | Q02UB7 | - | 2443324 - 2444430 | 40741.9 |
| aminotransferase ybdl | OCAR_6505 | P9WPZ4 | - | 2444443 - 2445594 | 41995.6 |
| rhodanese domain protein | OCAR_6506 | P73801 | - | 2445646 - 2445978 | 11538.7 |
| low affinity potassium transporter | OCAR_6507 | A5EHG1 | - | 2446073 - 2447974 | 68752.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.