Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mfs permease | OCAR_6478 | P96675 | + | 2416870 - 2417469 | 20760.2 |
| mfs permease | OCAR_6479 | P96675 | + | 2417556 - 2418077 | 17690.7 |
| extracellular ligand-binding receptor | OCAR_6480 | Q2YKQ9 | - | 2418143 - 2419339 | 42700.9 |
| hi0933-like protein | OCAR_6481 | Q795R8 | - | 2419435 - 2420673 | 43991.1 |
| 3-hydroxyisobutyrate dehydrogenase | OCAR_6482 | P63936 | - | 2420689 - 2421576 | 30016.2 |
| major facilitator superfamily mfs_1 | OCAR_6483 | O31444 | + | 2421770 - 2423050 | 46017.7 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 2 | OCAR_6484 | P56902 | + | 2423158 - 2424453 | 44615.0 |
| multidrug resistance protein mdtb | OCAR_6485 | C6CAI2 | - | 2424684 - 2427830 | 113549.0 |
| efflux transporter, rnd family, mfp subunit | OCAR_6486 | A6TBH3 | - | 2427833 - 2428978 | 40219.2 |
| transcriptional regulator, marr family | OCAR_6487 | B2U2E2 | + | 2429300 - 2429788 | 18149.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.