Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fmu | OCAR_6468 | Q2NQQ2 | - | 2406253 - 2407554 | 45926.1 |
| protein of unknown function | OCAR_6469 | Not Available | - | 2407574 - 2407918 | 12768.4 |
| inosine-5'-monophosphate dehydrogenase | OCAR_6470 | Q9KH33 | - | 2408000 - 2409490 | 52489.3 |
| inner membrane transport protein yieo | OCAR_6471 | P31474 | + | 2409809 - 2411272 | 51747.5 |
| ribosomal rna large subunit methyltransferase j | OCAR_6472 | B6JHM9 | - | 2411590 - 2412267 | 24221.1 |
| ppx/gppa phosphatase | OCAR_6473 | P0A270 | - | 2412295 - 2413296 | 35831.0 |
| hypothetical protein | OCAR_6474 | Not Available | + | 2413333 - 2413602 | 9796.77 |
| hypothetical protein | OCAR_6475 | Q212Q9 | + | 2413566 - 2414024 | 16265.4 |
| holdfast attachment protein c (protein hfac) | OCAR_6476 | Q45978 | + | 2414051 - 2415871 | 65987.9 |
| transcriptional regulatory protein | OCAR_6477 | Q55459 | - | 2415881 - 2416777 | 32361.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.