Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | OCAR_6458 | P55425 | - | 2397879 - 2398223 | 12354.5 |
| hypothetical protein | OCAR_6459 | Not Available | - | 2398414 - 2398563 | 5305.27 |
| conserved hypothetical protein | OCAR_6460 | Not Available | - | 2398833 - 2398970 | 4902.47 |
| conserved hypothetical protein | OCAR_6461 | Not Available | - | 2399037 - 2399408 | 13898.8 |
| hypothetical protein | OCAR_6462 | Not Available | + | 2399453 - 2399758 | 10419.7 |
| parb domain protein nuclease | OCAR_6463 | Q9ZGR8 | - | 2399867 - 2402068 | 79657.1 |
| hypothetical protein | OCAR_6464 | Not Available | + | 2402102 - 2402329 | 8180.93 |
| integrase | OCAR_6465 | P32053 | - | 2402869 - 2404128 | 47351.2 |
| hypothetical protein | OCAR_6466 | Not Available | + | 2404226 - 2404342 | 4349.54 |
| glutamine-hydrolyzing gmp synthase | OCAR_6467 | B6JHM4 | - | 2404444 - 2406039 | 57837.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.