Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chain a, yffb | OCAR_6398 | P24178 | - | 2339202 - 2339576 | 13608.8 |
| conserved hypothetical protein | OCAR_6399 | Not Available | - | 2339735 - 2340082 | 12136.8 |
| voltage-gated chloride channel | OCAR_6400 | Q87WD2 | + | 2340296 - 2341636 | 47662.5 |
| hypothetical protein | OCAR_6401 | Not Available | + | 2341782 - 2342123 | 11880.8 |
| hypothetical protein | OCAR_6402 | Not Available | - | 2342749 - 2344212 | 54523.1 |
| hypothetical protein | OCAR_6403 | Not Available | - | 2344212 - 2345846 | 60831.4 |
| conserved hypothetical protein | OCAR_6404 | Not Available | - | 2345876 - 2346826 | 35159.2 |
| hypothetical protein | OCAR_6405 | Not Available | - | 2346838 - 2346957 | 4647.57 |
| conserved hypothetical protein | OCAR_6406 | A0A009IHW8 | - | 2347040 - 2348248 | 43892.2 |
| exonuclease, rnase t and dna polymerase iii | OCAR_6407 | Q9PBJ8 | - | 2348273 - 2348827 | 20307.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.