Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | OCAR_6388 | B6JGY0 | - | 2330464 - 2331294 | 29406.7 |
| nnru protein | OCAR_6389 | Not Available | - | 2331297 - 2331920 | 21980.0 |
| peptide chain release factor 3 | OCAR_6390 | A5F904 | - | 2332183 - 2333895 | 62624.8 |
| small multidrug resistance protein | OCAR_6391 | Q8D1E4 | + | 2334021 - 2334335 | 10631.7 |
| inner-membrane translocator | OCAR_6392 | P22729 | - | 2334740 - 2335708 | 34945.7 |
| inner-membrane translocator | OCAR_6393 | P0A2J2 | - | 2335710 - 2336579 | 31065.5 |
| abc transporter atp-binding protein | OCAR_6394 | P21630 | - | 2336576 - 2337292 | 26140.1 |
| abc transporter atp-binding protein | OCAR_6395 | P21629 | - | 2337285 - 2338043 | 27674.3 |
| hypothetical protein | OCAR_6396 | Not Available | - | 2338118 - 2338246 | 4821.01 |
| conserved hypothetical protein | OCAR_6397 | Not Available | + | 2338273 - 2338905 | 23923.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.