Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | OCAR_6368 | Not Available | + | 2311490 - 2311681 | 6895.35 |
| 3-oxoacyl-(acyl-carrier-protein) reductase | OCAR_6369 | P72332 | - | 2311827 - 2312564 | 25621.2 |
| malonyl coa-acyl carrier protein transacylase | OCAR_6370 | P0AAJ0 | - | 2312580 - 2313536 | 32519.2 |
| 30s ribosomal protein s6 (rrp-s6) | OCAR_6371 | B6JGN7 | + | 2314205 - 2314639 | 16545.4 |
| ribosomal protein s18 | OCAR_6372 | B6JGW4 | + | 2314646 - 2314885 | 9066.34 |
| putative membrane protein | OCAR_6373 | Not Available | + | 2315107 - 2316087 | 34029.6 |
| ribosomal protein l9 | OCAR_6374 | B6JGW6 | + | 2316144 - 2316743 | 21618.5 |
| putative lipoprotein | OCAR_6375 | Not Available | - | 2316871 - 2317605 | 24540.6 |
| cyclopropane-fatty-acyl-phospholipid synthase | OCAR_6376 | P0A9H8 | + | 2317840 - 2319090 | 47562.4 |
| replicative dna helicase | OCAR_6377 | Q1RI04 | + | 2319185 - 2320732 | 56763.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.