Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dimethyladenosine transferase | OCAR_6358 | B6JGM4 | + | 2301071 - 2301919 | 30938.8 |
| alcohol dehydrogenase, zinc-binding | OCAR_6359 | Q96XE0 | + | 2301933 - 2302997 | 37427.4 |
| conserved hypothetical protein | OCAR_6360 | Not Available | + | 2303180 - 2304127 | 33087.9 |
| 2-hydroxychromene-2-carboxylate isomerase | OCAR_6361 | Q9X9Q7 | - | 2304138 - 2304752 | 22926.3 |
| shikimate transporter | OCAR_6362 | P76350 | - | 2304749 - 2306104 | 48478.9 |
| guanylate kinase | OCAR_6363 | Q1QKV7 | - | 2306702 - 2307352 | 24448.1 |
| conserved hypothetical protein | OCAR_6364 | P44726 | - | 2307358 - 2308245 | 31825.9 |
| conserved hypothetical protein | OCAR_6365 | P44720 | - | 2308391 - 2309731 | 47762.1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 2 | OCAR_6366 | P56902 | - | 2309846 - 2311165 | 46264.3 |
| acyl carrier protein | OCAR_6367 | B6JGN3 | - | 2311196 - 2311435 | 8601.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.