Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | OCAR_6348 | Not Available | + | 2289954 - 2290166 | 7650.19 |
| abc transporter, atpase subunit | OCAR_6349 | P63390 | + | 2290225 - 2292078 | 67175.3 |
| putative lipoprotein | OCAR_6350 | Not Available | - | 2292091 - 2292630 | 18953.6 |
| dna polymerase iii subunit chi | OCAR_6351 | Q9ZC94 | - | 2292842 - 2293306 | 17545.2 |
| cytosol aminopeptidase | OCAR_6352 | B6JGL8 | - | 2293431 - 2294933 | 52721.0 |
| hypothetical protein | OCAR_6353 | Not Available | + | 2294958 - 2295131 | 6414.77 |
| permease yjgp/yjgq | OCAR_6354 | P0ADC7 | + | 2295429 - 2296523 | 39655.6 |
| organic solvent tolerance protein | OCAR_6355 | Q6D0E3 | + | 2296574 - 2299033 | 90693.7 |
| sura n- domain family | OCAR_6356 | Q21MS8 | + | 2299049 - 2300041 | 36839.7 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | OCAR_6357 | Q3V7R9 | + | 2300064 - 2301074 | 35319.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.