Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ppx/gppa phosphatase | OCAR_6338 | P32608 | - | 2280588 - 2282030 | 52778.5 |
| polyphosphate kinase | OCAR_6339 | Q2IX63 | - | 2282146 - 2284386 | 83915.2 |
| chromosomal replication initiator, dnaa | OCAR_6340 | B7VGI4 | - | 2284498 - 2285190 | 24959.1 |
| cdp-alcohol phosphatidyltransferase | OCAR_6341 | O01916 | - | 2285193 - 2285735 | 19526.7 |
| hypothetical protein | OCAR_6342 | Not Available | - | 2285732 - 2285908 | 6737.51 |
| phosphoribosylformylglycinamidine cyclo-ligase | OCAR_6343 | Q215Q6 | + | 2285894 - 2286964 | 36807.8 |
| phosphoribosylglycinamide formyltransferase | OCAR_6344 | Q64737 | + | 2286961 - 2287614 | 23279.3 |
| integral membrane protein terc family | OCAR_6345 | O31603 | - | 2287753 - 2288592 | 29378.9 |
| nucleoside diphosphate kinase (ndk) | OCAR_6346 | B6JGK9 | - | 2288720 - 2289142 | 15051.0 |
| putative sulfur globule protein | OCAR_6347 | Not Available | + | 2289414 - 2289728 | 11156.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.